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Rapid measurement of 3J(H N-H alpha) and 3J(N-H beta) coupling constants in polypeptides

  • Ravi Pratap Barnwal
  • , Ashok K Rout
  • , Kandala V R Chary
  • , Hanudatta S Atreya
  • Tata Institute of Fundamental Research

Abstract

We present two NMR experiments, (3,2)D HNHA and (3,2)D HNHB, for rapid and accurate measurement of 3J(H N-H alpha) and 3J(N-H beta) coupling constants in polypeptides based on the principle of G-matrix Fourier transform NMR spectroscopy and quantitative J-correlation. These experiments, which facilitate fast acquisition of three-dimensional data with high spectral/digital resolution and chemical shift dispersion, will provide renewed opportunities to utilize them for sequence specific resonance assignments, estimation/characterization of secondary structure with/without prior knowledge of resonance assignments, stereospecific assignment of prochiral groups and 3D structure determination, refinement and validation. Taken together, these experiments have a wide range of applications from structural genomics projects to studying structure and folding in polypeptides.

Original languageEnglish
JournalJournal of Biomolecular NMR
Volume39
Issue number4
Pages (from-to)259-63
Number of pages5
ISSN0925-2738
DOIs
Publication statusPublished - 12.2007

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