Expressionview: visualization of quantitative trait loci and gene-expression data in Ensembl.

Gertrud Fischer; Saleh M. Ibrahim; Gudrun A. Brockmann; Jens Pahnke; Ezio Bartocci; Hans Jürgen Thiesen; Pablo Serrano-Fernández; Steffen Möller

Expressionview: visualization of quantitative trait loci and gene-expression data in Ensembl.

Gertrud Fischer^*, Saleh M. Ibrahim, Gudrun A. Brockmann, Jens Pahnke, Ezio Bartocci, Hans Jürgen Thiesen, Pablo Serrano-Fernández, Steffen Möller

^*Corresponding author for this work

University of Rostock

23 Citations (Scopus)

Abstract

We present here a software tool for combined visualization of gene-expression data and quantitative trait loci (QTL). The application is implemented as an extension to the Ensembl project and caters for a direct transition from microarray experiments of gene or protein expression levels to the genomic context of individual genes and QTL. It supports the visualization of gene clusters and the selection of functional candidate genes in the context of research on complex traits.

Original language	English
Journal	Genome Biology
Volume	4
Issue number	11
Pages (from-to)	R77
Number of pages	1
ISSN	1474-7596
Publication status	Published - 2003

Research Areas and Centers

Academic Focus: Center for Infection and Inflammation Research (ZIEL)

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

Cite this

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abstract = "We present here a software tool for combined visualization of gene-expression data and quantitative trait loci (QTL). The application is implemented as an extension to the Ensembl project and caters for a direct transition from microarray experiments of gene or protein expression levels to the genomic context of individual genes and QTL. It supports the visualization of gene clusters and the selection of functional candidate genes in the context of research on complex traits.",

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AU - Fischer, Gertrud

AU - Ibrahim, Saleh M.

AU - Brockmann, Gudrun A.

AU - Pahnke, Jens

AU - Bartocci, Ezio

AU - Thiesen, Hans Jürgen

AU - Serrano-Fernández, Pablo

AU - Möller, Steffen

PY - 2003

Y1 - 2003

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AB - We present here a software tool for combined visualization of gene-expression data and quantitative trait loci (QTL). The application is implemented as an extension to the Ensembl project and caters for a direct transition from microarray experiments of gene or protein expression levels to the genomic context of individual genes and QTL. It supports the visualization of gene clusters and the selection of functional candidate genes in the context of research on complex traits.

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M3 - Journal articles

C2 - 14611663

AN - SCOPUS:1542682515

SN - 1474-7596

VL - 4

SP - R77

JO - Genome Biology

JF - Genome Biology

IS - 11

ER -

Expressionview: visualization of quantitative trait loci and gene-expression data in Ensembl.

Abstract

Research Areas and Centers

UN SDGs

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