Johannes Lotz

Research output

Research Output per year 2010 2012 2013 2014 2015 2020 2021 2022

• 11 Journal articles
• 4 Conference contribution
• 2 Poster
• 1 Comments/Debates
• 2 More
  • 1 Scientific review articles
  • 1 Doctoral Theses

Research Output per year

Research Output per year

Search results

• 2022

  Parietal epithelial cells maintain the epithelial cell continuum forming Bowman`s space in focal segmental glomerulosclerosis

  Miesen, L., Bándi, P., Willemsen, B., Mooren, F., Strieder, T., Boldrini, E., Drenic, V., Eymael, J., Wetzels, R., Lotz, J., Weiss, N., Steenbergen, E., van Kuppevelt, T. H., van Erp, M., van der Laak, J., Endlich, N., Moeller, M. J., Wetzels, J. F. M., Jansen, J. & Smeets, B., 14.03.2022, In: DMM Disease Models and Mechanisms. 2022, Issue 3

  Research output: Journal Articles › Journal articles › Research › peer-review
• 2021

  Artificial Intelligence in Pathology: From Prototype to Product

  Homeyer, A., Lotz, J., Schwen, L. O., Weiss, N., Romberg, D., Höfener, H., Zerbe, N. & Hufnagl, P., 01.2021, In: Journal of Pathology Informatics. 12, 1, p. 13

  Research output: Journal Articles › Journal articles › Research › peer-review

• Optimized tumour infiltrating lymphocyte assessment for triple negative breast cancer prognostics

  Balkenhol, M. C., Ciompi, F., Świderska-Chadaj, Ż., van de Loo, R., Intezar, M., Otte-Höller, I., Geijs, D., Lotz, J., Weiss, N., de Bel, T., Litjens, G., Bult, P. & van der Laak, J. A., 04.2021, In: Breast. 56, p. 78-87 10 p.

  Research output: Journal Articles › Journal articles › Research › peer-review

  • Evaluation 100%
  • Triple Negative Breast Cancer 100%
  • Tumor Infiltrating Lymphocyte 100%
  • Direction 100%
  • Tissue Compartment 100%
  2 Citations (Scopus)
• 2020

  ANHIR: Automatic Non-Rigid Histological Image Registration Challenge

  Borovec, J., Kybic, J., Arganda-Carreras, I., Sorokin, D. V., Bueno, G., Khvostikov, A. V., Bakas, S., Chang, E. I. C., Heldmann, S., Kartasalo, K., Latonen, L., Lotz, J., Noga, M., Pati, S., Punithakumar, K., Ruusuvuori, P., Skalski, A., Tahmasebi, N., Valkonen, M. & Venet, L. & 9 others, Wang, Y., Weiss, N., Wodzinski, M., Xiang, Y., Xu, Y., Yan, Y., Yushkevich, P., Zhao, S. & Munoz-Barrutia, A., 01.10.2020, In: IEEE Transactions on Medical Imaging. 39, 10, p. 3042-3052 11 p.

  Research output: Journal Articles › Journal articles › Research › peer-review

  • Algorithms 33%
  • Team 33%
  5 Citations (Scopus)

• Combined Local and Global Image Registration and its Application to Large-Scale Images in Digital Pathology

  Lotz, J., 05.05.2020, 179 p.

  Research output: Published Theses › Doctoral Theses

  • Image 100%

• Virtual Staining for Mitosis Detection in Breast Histopathology

  Mercan, C., Mooij, G. C. A. M., Tellez, D., Lotz, J., Weiss, N., Van Gerven, M. & Ciompi, F., 04.2020, 2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI). IEEE, p. 1770-1774 5 p. 9098409. (Proceedings - International Symposium on Biomedical Imaging).

  Research output: Chapters in Books/Reports/Conference Proceedings › Conference contribution › peer-review

  • Convolutional Neural Network 100%
  • Annotation 50%
  • Diagnosis 50%
  • Generative Adversarial Networks 50%
• 2019

  Epithelium segmentation using deep learning in H&E-stained prostate specimens with immunohistochemistry as reference standard

  Bulten, W., Bándi, P., Hoven, J., Loo, R. V. D., Lotz, J., Weiss, N., Laak, J. V. D., Ginneken, B. V., Hulsbergen-van de Kaa, C. & Litjens, G., 01.12.2019, In: Scientific Reports. 9, 1, 864.

  Research output: Journal Articles › Journal articles › Research › peer-review

  • Epithelium 100%
  • Prostate 100%
  • Deep Learning Method 100%
  • Tissue Section 50%
  • Dataset 50%
  18 Citations (Scopus)
• 2017

  Integration of 3D multimodal imaging data of a head and neck cancer and advanced feature recognition

  Lotz, J. M., Hoffmann, F., Lotz, J., Heldmann, S., Trede, D., Oetjen, J., Becker, M., Ernst, G., Maas, P., Alexandrov, T., Guntinas-Lichius, O., Thiele, H. & von Eggeling, F., 01.07.2017, In: Biochimica et Biophysica Acta - Proteins and Proteomics. 1865, 7, p. 946-956 11 p.

  Research output: Journal Articles › Journal articles › Research › peer-review

  • Head and Neck Cancer 100%
  • Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry 100%
  • Immunohistochemistry 60%
  • Haematoxylin 60%
  • Eosin 60%
  5 Citations (Scopus)
• 2015

  Multimodal Image Registration in Digital Pathology Using Cell Nuclei Densities

  Weiss, N., Lotz, J. & Modersitzki, J., 25.02.2015, Bildverarbeitung für die Medizin 2015. Handels, H., Deserno, T. M., Meinzer, H.-P. & Tolxdorff, T. (eds.). Berlin, Heidelberg: Springer Vieweg, Berlin Heidelberg, p. 245 1 p. (Informatik aktuell).

  Research output: Chapters in Books/Reports/Conference Proceedings › Conference contribution › peer-review

  • 3d Reconstruction 100%
  • Image Information 100%
  • Mutual Information 100%

• Patch-Based Nonlinear Image Registration for Gigapixel Whole Slide Images

  Lotz, J. M., Olesch, J., Müller, B., Polzin, T., Galuschka, P., Laue, H., Warth, A., Lahrmann, B., Grabe, N., Sedlaczek, O., Breuhahn, K., Heldmann, S., Modersitzki, J., Lotz, J. & González-Vallinas, M., 01.09.2015, In: IEEE Transactions on Biomedical Engineering. 63, 9, p. 1812-1819 8 p.

  Research output: Journal Articles › Journal articles › Research › peer-review

  • Deformation 50%
  • Image Data 25%
  • Combines 25%
• 2014

  Cancer cell invasion and EMT marker Expression - a three-dimensional study of the human cancer-host interface

  Bronsert, P., Enderle-Ammour, K., Bader, M., Timme, S., Kuehs, M., Csanadi, A., Kayser, G., Kohler, I., Bausch, D., Hoeppner, J., Hopt, U. T., Keck, T., Stickeler, E., Passlick, B., Schilling, O., Reiss, C. P., Vashist, Y., Brabletz, T., Berger, J. & Lotz, J. & 3 others, Olesch, J., Werner, M. & Wellner, U. F., 01.11.2014, In: The Journal of pathology. 234, 3, p. 410-422 13 p.

  Research output: Journal Articles › Journal articles › Research › peer-review

  • Cancer Cell 100%
  • Marker 100%
  • Cell Invasion 100%
  • Neoplasm 50%
  • Evaluation 25%
  57 Citations (Scopus)

• Elastic image registration on whole slide images for digital double staining and 3D reconstruction

  Lotz, J., Berger, J., Thiele, H., Olesch, J., Müller, B., Breuhahn, K., Warth, A., Grabe, N., Lahrmann, B., Sedlaczek, O. & Heldmann, S., 2014. 1 p.

  Research output: Contribution to conference › Poster › peer-review

• Zooming in: High Resolution 3D Reconstruction of Differently Stained Histological Whole Slide Images

  Lotz, J., Berger, J., Müller, B., Breuhahn, K., Grabe, N., Heldmann, S., Homeyer, A., Lahrmann, B., Laue, H., Olesch, J., Schwier, M., Sedlaczek, O. & Warth, A., 20.03.2014, Medical Imaging 2014: Digital Pathology. SPIE, Vol. 9041. p. 904104-1-7 7 p. (Proceedings of SPIE; vol. 9041).

  Research output: Chapters in Books/Reports/Conference Proceedings › Conference contribution › peer-review

  • High Resolution 100%
  • Deformation 50%
  • Macroscopic 25%
  • Limitations 25%
  • Visual Inspection 25%
• 2013

  Real time motion analysis in 4D medical imaging using conditional density propagation

  Lotz, J., Fischer, B., Olesch, J. & Günther, M., 13.03.2013, Medical Imaging 2013: Image Processing. Haynor, D. R. & Ourselin, S. (eds.). SPIE, Vol. 8669. p. 86690T-86690T-7 7 p. (Proceedings of SPIE; vol. 8669).

  Research output: Chapters in Books/Reports/Conference Proceedings › Conference contribution › peer-review

  • Image 100%
  • Real Time 100%
  • Conditionals 100%
  • image feature 50%
  • Algorithms 50%

• Virtual Double Staining Using Elastic Image Registration

  Berger, J., Lotz, J., Olesch, J., Breuhahn, M. S. K., Müller, B., Warth, A., Grabe, N., Lahrmann, B. & Sedlaczek, O., 2013. 1 p.

  Research output: Contribution to conference › Poster

  • Loss 100%
  • High Resolution 100%
  • Staining Technique 100%
• 2012

  Erratum: Konsensusempfehlungen der DRG/DGK/DGPK zum Einsatz der Herzbildgebung mit Computertomografie und Magnetresonanztomografie (RoFo Fortschritte auf dem Gebiet der Rontgenstrahlen und der Bildgebenden Verfahren (2012) DOI: 10.1055/s-0031-1299400)

  Translated title of the contribution: Erratum: Consensus recommendations of the German Radiology Society (DRG), the German Cardiac Society (DGK) and the German society for pediatric cardiology (DGPK) on the use of cardiac imaging with computed tomography and magnetic resonance imaging (RoFo Fortschritte auf dem Gebiet der Rontgenstrahlen und der Bildgebenden Verfahren (2012)Achenbach, S., Barkhausen, J., Beer, M., Beerbaum, P., Dill, T., Eichhorn, J., Fratz, S., Gutberlet, M., Hoffmann, M., Huber, A., Hunold, P., Klein, C., Krombach, G., Kreitner, K. F., Kühne, T., Lotz, J., Maintz, D., Mahrholdt, H., Merkle, N. & Messroghli, D. & 7 others, Miller, S., Paetsch, I., Radke, P., Steen, H., Thiele, H., Sarikouch, S. & Fischbach, R., 10.05.2012, In: RoFo Fortschritte auf dem Gebiet der Rontgenstrahlen und der Bildgebenden Verfahren. 184, 4

  Research output: Journal Articles › Comments/Debates

• Kardiovaskuläre Bildgebung - interdisziplinär radiologisch

  Translated title of the contribution: Cardiovascular Radiology - An Interdisciplinary ApproachLotz, J., Barkhausen, J. & Gutberlet, M., 04.12.2012, In: RoFo Fortschritte auf dem Gebiet der Rontgenstrahlen und der Bildgebenden Verfahren. 184, 12, p. 1093-1098 6 p.

  Research output: Journal Articles › Scientific review articles › Research

  3 Citations (Scopus)

• Konsensusempfehlungen der DRG/DGK/DGPK zum Einsatz der Herzbildgebung mit Computertomografie und Magnetresonanztomografie

  Translated title of the contribution: Consensus recommendations of the German Radiology Society (DRG), the German Cardiac Society (DGK) and the German Society for Pediatric Cardiology (DGPK) on the Use of Cardiac Imaging with Computed Tomography and Magnetic Resonance ImagingAchenbach, S., Barkhausen, J., Beer, M., Beerbaum, P., Dill, T., Eichhorn, J., Fratz, S., Gutberlet, M., Hoffmann, M., Huber, A., Hunold, P., Klein, C., Krombach, G., Kreitner, K. F., Kühne, T., Lotz, J., Maintz, D., Marholdt, H., Merkle, N. & Messroghli, D. & 7 others, Miller, S., Paetsch, I., Radke, P., Steen, H., Thiele, H., Sarikouch, S. & Fischbach, R., 19.03.2012, In: RoFo Fortschritte auf dem Gebiet der Rontgenstrahlen und der Bildgebenden Verfahren. 184, 4, p. 345-368 24 p.

  Research output: Journal Articles › Journal articles › Research › peer-review

  • Consensus 100%
  • Computer Assisted Tomography 100%
  • Magnetic Resonance Imaging 100%
  • Pediatric Cardiology 100%
  • Cardiac Imaging 100%
  64 Citations (Scopus)

• Konsensusempfehlungen der DRG/DGK/DGPK zum einsatz der herzbildgebung mit computertomographie und magnetresonanztomographie

  Translated title of the contribution: Consensus recommendations of the German Radiology Society (DRG), the German Cardiac Society (DGK) and the German Society for Pediatric Cardiology (DGPK) on the use of cardiac imaging with computed tomography and magnetic resonance imagingAchenbach, S., Barkhausen, J., Beer, M., Beerbaum, P., Dill, T., Eichhorn, J., Fratz, S., Gutberlet, M., Hoffmann, M., Huber, A., Hunold, P., Klein, C., Krombach, G., Kreitner, K. F., Kühne, T., Lotz, J., Maintz, D., Marholdt, H., Merkle, N. & Messroghli, D. & 7 others, Miller, S., Paetsch, I., Radke, P., Steen, H., Thiele, H., Sarikouch, S. & Fischbach, R., 01.04.2012, In: Kardiologe. 6, 2, p. 105-125 21 p.

  Research output: Journal Articles › Journal articles › Research › peer-review

  • Consensus 100%
  • Computer Assisted Tomography 100%
  • Magnetic Resonance Imaging 100%
  • Pediatric Cardiology 100%
  • Cardiac Imaging 100%
  13 Citations (Scopus)
• 2010

  Die Arbeitsgemeinschaft Herz- und Gefäßdiagnostik stellt sich vor

  Translated title of the contribution: An introduction to the cardiac and vascular diagnostics teamMiller, S., Gutberlet, M., Lotz, J., Fischbach, R. & Barkhausen, J., 08.11.2010, In: RoFo Fortschritte auf dem Gebiet der Rontgenstrahlen und der Bildgebenden Verfahren. 182, 11, p. 943-946 4 p.

  Research output: Journal Articles › Journal articles › Research › peer-review

  1 Citation (Scopus)