Institute of Medical Informatics

2024

Arbeitsgruppe Interoperabilität: Kerndatensatz und Informationssysteme für Integration und Austausch von Daten in der Medizininformatik-Initiative

Translated title of the contribution: Interoperability Working Group: core dataset and information systems for data integration and data exchange in the Medical Informatics InitiativeAmmon, D., Kurscheidt, M., Buckow, K., Kirsten, T., Löbe, M., Meineke, F., Prasser, F., Saß, J., Sax, U., Stäubert, S., Thun, S., Wettstein, R., Wiedekopf, J. P., Wodke, J. A. H., Boeker, M. & Ganslandt, T., 06.2024, In: Bundesgesundheitsblatt - Gesundheitsforschung - Gesundheitsschutz. 67, 6, p. 656-667 12 p.

Research output: Journal Articles › Journal articles › Research › peer-review

Binary classification of gait impairments using a capacitance-based sensor floor system

Najork, S., Liebenow, L., Scherf, L. P., Steinhage, A., Sieciński, S. & Grzegorzek, M., 29.01.2024, p. 105-106. 2 p.

Research output: Contribution to conference › Conference Papers › peer-review

Cardiovascular Disease Preliminary Diagnosis Application Using SQL Queries: Filling Diagnostic Gaps in Resource-Constrained Environments

Doniec, R., Berepiki, E. O., Piaseczna, N., Sieciński, S., Piet, A., Irshad, M. T., Tkacz, E. J., Grzegorzek, M. & Glinkowski, W. M., 05.02.2024, In: Applied Sciences (Switzerland). 14, 3, p. 1320 1320.

Research output: Journal Articles › Journal articles › Research › peer-review

Differential Effects of Thermal Stimuli in Eliciting Temporal Contrast Enhancement: A Psychophysical Study

Luebke, L., von Selle, J., Adamczyk, W. M., Knorr, M. J., Carvalho, G. F., Gouverneur, P., Luedtke, K. & Szikszay, T. M., 01.2024, In: Journal of Pain. 25, 1, p. 228-237 10 p.

Research output: Journal Articles › Journal articles › Research › peer-review

Does glucose affect our vision? A preliminary study using smart glasses

Doniec, R., Piaseczna, N., Sieciński, S., Grzegorzek, M. & Tkacz, E. J., 29.01.2024, p. 113-114. 2 p.

Research output: Contribution to conference › Conference Papers › peer-review

Driving Reality vs. Simulator: Data Distinctions

Piaseczna, N., Doniec, R. J., Sieciński, S., Barańska, K., Jędrychowski, M. & Grzegorzek, M., 10.07.2024, In: Electronics (Switzerland). 13, 14, 2708.

Research output: Journal Articles › Journal articles › Research › peer-review

Estimation of indoor occupancy level based on machine learning and multimodal environmental data

Siecinski, S., Mohammadi, E. & Grzegorzek, M., 25.06.2024, 2024 IEEE 22nd Mediterranean Electrotechnical Conference (MELECON). IEEE, p. 868-872

Research output: Chapters in Books/Reports/Conference Proceedings › Conference contribution › peer-review

Evaluation of the quality of electrocardiograms, seismocardiograms and gyrocardiograms based on characteristics derived from symmetric projection attractor reconstruction

Sieciński, S., Scherf, L. P. & Grzegorzek, M., 29.01.2024, p. 161-162. 2 p.

Research output: Contribution to conference › Conference Papers › peer-review

Machine Learning-Based Gesture Recognition Glove: Design and Implementation

Filipowska, A., Filipowski, W., Raif, P., Pieniążek, M., Bodak, J., Ferst, P., Pilarski, K., Sieciński, S., Doniec, R. J., Mieszczanin, J., Skwarek, E., Bryzik, K., Henkel, M. & Grzegorzek, M., 23.09.2024, In: Sensors (Basel, Switzerland). 24, 18, 6157.

Research output: Journal Articles › Journal articles › Research › peer-review

Survival analysis for lung cancer patients: A comparison of Cox regression and machine learning models

Germer, S. & AI-CARE Working Group, 11.2024, In: International Journal of Medical Informatics. 191, p. 105607 105607.

Research output: Journal Articles › Journal articles › Research › peer-review

The detection of alcohol intoxication using electrooculography signals from smart glasses and machine learning techniques

Doniec, R., Piaseczna, N., Duraj, K., Sieciński, S., Irshad, M. T., Karpiel, I., Urzeniczok, M., Huang, X., Piet, A., Nisar, M. A. & Grzegorzek, M., 30.01.2024, In: Systems and Soft Computing. 6, 6, p. 200078 200078.

Research output: Journal Articles › Journal articles › Research › peer-review

2023

Anatomy-guided domain adaptation for 3D in-bed human pose estimation

Bigalke, A., Hansen, L., Diesel, J., Hennigs, C., Rostalski, P. & Heinrich, M. P., 10.2023, In: Medical Image Analysis. 89, 102887.

Research output: Journal Articles › Journal articles › Research › peer-review

1 Citation (Scopus)

Assessment of Quality of Gyrocardiograms Based on Features Derived from Symmetric Projection Attractor Reconstruction

Sieciński, S., Irshad, M. T., Hasan, M. A., Tkacz, E. & Grzegorzek, M., 10.2023, p. 15:1-15:5. 5 p.

Research output: Contribution to conference › Conference Papers › peer-review

Chaos analysis of the cortical boundary for the recognition of psychosis

Korda, A. I., Andreou, C., Avram, M., Frisman, M., Aliqadri, M., Riecher-Rössler, A., Handels, H., Martinetz, T. & Borgwardt, S., 2023, In: Journal of Psychiatry and Neuroscience. 48, 2, p. E135-E142

Research output: Journal Articles › Journal articles › Research › peer-review

Classification of Recorded Electrooculographic Signals on Drive Activity for Assessing Four Kind of Driver Inattention by Bagged Trees Algorithm: A Pilot Study

Doniec, R., Sieciński, S., Piaseczna, N., Duraj, K., Chwał, J., Gawlikowski, M. & Tkacz, E., 11.09.2023, p. 225-236. 12 p.

Research output: Contribution to conference › Conference Papers › peer-review

Comparison of Heart Rate Variability Indices Based on Seismocardiograms from Healthy Volunteers and Patients with Valvular Heart Diseases

Siecinski, S., Kostka, P. S. & Tkacz, E. J., 14.02.2023, CinC. p. 1-4 4 p. (Computing in Cardiology; vol. 2022-September).

Research output: Chapters in Books/Reports/Conference Proceedings › Conference contribution › peer-review

Demarcation of brain and tumor tissue with optical coherence tomography using prior neural networks

Strenge, P., Lange, B., Draxinger, W., Hagel, C., Grill, C., Danicke, V., Theisen-Kunde, D., Spahr-Hess, S., Bonsanto, M. M., Huber, R., Handels, H. & Brinkmann, R., 2023, Optical Coherence Imaging Techniques and Imaging in Scattering Media V. Vakoc, B. J., Wojtkowski, M. & Yasuno, Y. (eds.). SPIE, Vol. 12632. p. 126321P

Research output: Chapters in Books/Reports/Conference Proceedings › Conference contribution › peer-review

Experiences of the Telemedicine and eHealth Conferences in Poland—A Cross-National Overview of Progress in Telemedicine

Doniec, R. J., Piaseczna, N. J., Szymczyk, K. A., Jacennik, B., Sieciński, S., Mocny-Pachońska, K., Duraj, K., Cedro, T., Tkacz, E. J. & Glinkowski, W. M., 01.2023, In: Applied Sciences (Switzerland). 13, 1, 587.

Research output: Journal Articles › Journal articles › Research › peer-review

2 Citations (Scopus)

Explainable Artificial Intelligence (XAI) in Pain Research: Understanding the Role of Electrodermal Activity for Automated Pain Recognition

Gouverneur, P., Li, F., Shirahama, K., Luebke, L., Adamczyk, W. M., Szikszay, T. M., Luedtke, K. & Grzegorzek, M., 02.2023, In: Sensors. 23, 4, 1959.

Research output: Journal Articles › Journal articles › Research › peer-review

4 Citations (Scopus)

Heart Rate Variability Analysis on Electrocardiograms, Seismocardiograms and Gyrocardiograms of Healthy Volunteers and Patients with Valvular Heart Diseases

Sieciński, S., Tkacz, E. J. & Kostka, P. S., 14.02.2023, In: Sensors. 23, 4, p. 2152 1 p., 4.

Research output: Journal Articles › Journal articles › Research › peer-review

In atrial fibrillation epilepsy risk differs between oral anticoagulants: active comparator, nested case-control study

Platzbecker, K., Müller-Fielitz, H., Foraita, R., Koepp, M. J., Voss, A., Pflock, R., Linder, R., Pigeot, I., Schink, T. & Schwaninger, M., 2023, In: Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology. 25, 5

Research output: Journal Articles › Journal articles › Research › peer-review

Introducing a non-invasive app for cardiovascular disease diagnosis support - a pilot study

Doniec, R. J., Piaseczna, N., Berepiki, E., Irshad, M. T., Huang, X., Sieciński, S. & Grzegorzek, M., 2023.

Research output: Contribution to conference › Conference Papers › peer-review

Mettertron – Bridging Metadata Repositories and Terminology Servers

Schladetzky, J., Kock-Schoppenhauer, A. K., Drenkhahn, C., Ingenerf, J. & Wiedekopf, J., 12.09.2023, Volume 307: German Medical Data Sciences 2023 – Science. Close to People..

Research output: Chapters in Books/Reports/Conference Proceedings › Conference contribution › peer-review

MIMIC-IV on FHIR: Converting a decade of in-patient data into an exchangeable, interoperable format

Bennett, A. M., Ulrich, H., Van Damme, P., Wiedekopf, J. & Johnson, A. E. W., 01.04.2023, In: Journal of the American Medical Informatics Association. 30, 4, p. 718-725 8 p.

Research output: Journal Articles › Journal articles › Research › peer-review

4 Citations (Scopus)

Objective Measurement of Subjective Pain Perception with Autonomic Body Reactions in Healthy Subjects and Chronic Back Pain Patients: An Experimental Heat Pain Study

Luebke, L., Gouverneur, P., Szikszay, T. M., Adamczyk, W. M., Luedtke, K. & Grzegorzek, M., 10.2023, In: Sensors. 23, 19, 8231.

Research output: Journal Articles › Journal articles › Research › peer-review

Optimizing sleep staging on multimodal time series: Leveraging borderline synthetic minority oversampling technique and supervised convolutional contrastive learning

Huang, X., Schmelter, F., Irshad, M. T., Piet, A., Nisar, M. A., Sina, C. & Grzegorzek, M., 11.2023, In: Computers in Biology and Medicine. 166, 107501.

Research output: Journal Articles › Journal articles › Research › peer-review

Performance Benchmarking of FHIR Terminology Operations in ETL Jobs

Wiedekopf, J., Drenkhahn, C. & Ingenerf, J., 18.05.2023, Volume 302: Caring is Sharing – Exploiting the Value in Data for Health and Innovation.

Research output: Chapters in Books/Reports/Conference Proceedings › Conference contribution › peer-review

Psychological mechanisms of offset analgesia: The effect of expectancy manipulation

Szikszay, T. M., Adamczyk, W. M., Panskus, J., Heimes, L., David, C., Gouverneur, P. & Luedtke, K., 01.2023, In: PLoS ONE. 18, 1 January, e0280579.

Research output: Journal Articles › Journal articles › Research › peer-review

Publicly available signal databases containing seismocardiographic signals-the state in early 2023

Sieciński, S., Grzegorzek, M. & Tkacz, E. J., 11.12.2023, p. 1-4. 4 p.

Research output: Contribution to conference › Conference Papers › peer-review

Random Forest and Gradient Boosted Trees for Patient Individualized Contrast Agent Dose Reduction in CT Angiography

Pallenberg, R., Fleitmann, M., Stroth, A. M., Gerlach, J., Fürschke, A., Barkhausen, J., Bischof, A. & Handels, H., 18.05.2023, In: Studies in Health Technology and Informatics. 302, p. 952-956 5 p.

Research output: Journal Articles › Journal articles › Research › peer-review

Segmentation of weakly visible environmental microorganism images using pair-wise deep learning features

Kulwa, F., Li, C., Grzegorzek, M., Rahaman, M. M., Shirahama, K. & Kosov, S., 01.2023, In: Biomedical Signal Processing and Control. 79, p. 104168 1 p., 104168.

Research output: Journal Articles › Journal articles › Research › peer-review

2 Citations (Scopus)

Sensor-Based Classification of Primary and Secondary Car Driver Activities Using Convolutional Neural Networks

Doniec, R., Konior, J., Sieciński, S., Piet, A., Irshad, M. T., Piaseczna, N., Hasan, M. A., Li, F., Nisar, M. A. & Grzegorzek, M., 13.06.2023, In: Sensors (Basel, Switzerland). 23, 12, p. 5551 1 p., 5551.

Research output: Journal Articles › Journal articles › Research › peer-review

Sensor-Based Detection of Food Hypersensitivity Using Machine Learning

Jablonski, L., Jensen, T., Ahlemann, G. M., Huang, X., Tetzlaff-Lelleck, V. V., Piet, A., Schmelter, F., Dinkler, V. S., Sina, C. & Grzegorzek, M., 21.09.2023, Proceedings of the 8th International Workshop on Sensor-based Activity Recognition and Artificial Intelligence, iWOAR 2023. Matthies, D. J. C., Gregorzek, M., Kuijper, A. & Leutheuser, H. (eds.). Association for Computing Machinery, No. 11. (ACM International Conference Proceeding Series).

Research output: Chapters in Books/Reports/Conference Proceedings › Conference contribution › peer-review

Study protocol to investigate the efficacy of confocal laser endomicroscopy-based selective single-elimination diet over standard fivefold elimination diet in patients with endomicroscopically proven food intolerance: app-assisted, monocentric, double-blind, randomised and controlled trial in Germany

Heßler, N., Kordowski, A., Sasse, J., Ahlemann, G., Schulz, F., Schröder, T., Exner, A., Jablonski, L., Jappe, U., Bischoff, S. C., Grzegorzek, M., König, I. R. & Sina, C., 02.11.2023, In: BMJ Open. 13, 11, e072024.

Research output: Journal Articles › Journal articles › Research › peer-review

Symmetric Projection Attractor Reconstruction Analysis As a Method for Assessment of The Quality of Seismocardiograms in Healthy Population

Sieciński, S., Irshad, M. T., Hasan, M. A., Tkacz, E. J., Kostka, P. S. & Grzegorzek, M., 11.12.2023, p. 1-4. 4 p.

Research output: Contribution to conference › Conference Papers › peer-review

Using Barometer for Floor Assignation within Statistical Indoor Localization

Fetzer, T., Ebner, F., Deinzer, F. & Grzegorzek, M., 01.2023, In: Sensors. 23, 1, p. 80 1 p., 1.

Research output: Journal Articles › Journal articles › Research › peer-review

WASP—A Web Application to Support Syntactically and Semantically Correct SNOMED CT Postcoordination

Drenkhahn, C., Ohlsen, T., Wiedekopf, J. & Ingenerf, J., 05.2023, In: Applied Sciences (Switzerland). 13, 10, 6114.

Research output: Journal Articles › Journal articles › Research › peer-review

2022

Abstract: Light-weight Semantic Segmentation and Labelling of Vertebrae in 3D-CT Scans

Hempe, H., Yilmaz, E. B., Meyer, C. & Heinrich, M. P., 05.04.2022, Bildverarbeitung für die Medizin 2022. Springer, p. 19 19 p. (Informatik Aktuell).

Research output: Chapters in Books/Reports/Conference Proceedings › Conference contribution › peer-review

A Comparison of Feature Extraction Models for Medical Image Captioning

Germer, S., Uzunova, H., Ehrhardt, J., Feldhus, N., Thomas, P. & Handels, H., 19.08.2022.

Research output: Contribution to conference › Abstracts › peer-review

A Comprehensive Review of Computer-aided Whole-slide Image Analysis: From Datasets to Feature Extraction, Segmentation, Classification and Detection Approaches

Li, X., Li, C., Rahaman, M. M., Sun, H., Li, X., Wu, J., Yao, Y. & Grzegorzek, M., 08.2022, In: Artificial Intelligence Review (Springer, IF: 8.139). 55, 6, p. 4809-4878 70 p., 6.

Research output: Journal Articles › Journal articles › Research › peer-review

Assessment of Muscle Fatigue During The Walk on a Treadmill in Healthy Subjects Based on Median Frequency of Surface Electromyogram

Siecinski, S., Kostka, P. S. & Tkacz, E. J., 03.08.2022, 2022 IEEE 21st Mediterranean Electrotechnical Conference (MELECON), Palermo, Italy, 14-16 June 2022. p. 436-441

Research output: Chapters in Books/Reports/Conference Proceedings › Conference contribution › peer-review

A systematic comparison of generative models for medical images

Uzunova, H., Wilms, M., Forkert, N. D., Handels, H. & Ehrhardt, J., 07.2022, In: International Journal of Computer Assisted Radiology and Surgery. 17, 7, p. 1-12 12 p., 7.

Research output: Journal Articles › Journal articles › Research › peer-review

Autoencoders and variational autoencoders in medical image analysis

Ehrhardt, J. & Wilms, M., 2022, Biomedical Image Synthesis and Simulation: Methods and Applications. Elsevier B.V., p. 129-162 34 p.

Research output: Chapters in Books/Reports/Conference Proceedings › Chapter › peer-review

Changes in SmO2 Levels During the March on a Treadmill and Rest in Healthy Subjects

Sieciński, S., Kostka, P. S. & Tkacz, E. J., 02.03.2022, Lecture Notes in Networks and Systems: nternational Conference on Information Technology and Systems, ICITS 2022. Springer, Cham, Vol. 441. p. 96-105

Research output: Chapters in Books/Reports/Conference Proceedings › Conference contribution › peer-review

Chaos analysis of the brain topology in first-episode psychosis and clinical high risk patients

Korda, A. I., Andreou, C., Avram, M., Handels, H., Martinetz, T. & Borgwardt, S., 13.10.2022, In: Frontiers in Psychiatry. 13, 965128.

Research output: Journal Articles › Journal articles › Research › peer-review

2 Citations (Scopus)

Classification of Roads and Types of Public Roads Using EOG Smart Glasses and an Algorithm Based on Machine Learning While Driving a Car

Doniec, R., Piaseczna, N., Li, F., Duraj, K., Pour, H. H., Grzegorzek, M., Mocny-Pachońska, K. & Tkacz, E., 09.2022, In: Electronics (Switzerland). 11, 18, 2960.

Research output: Journal Articles › Journal articles › Research › peer-review

Continuous benchmarking in medical image registration-review of the current state of the Learn2Reg challenge

Hansen, L., Hering, A. D., Großbröhmer, C. & Heinrich, M., 21.04.2022.

Research output: Contribution to conference › Conference Papers › peer-review

Correction to: Detecting Walking Challenges in Gait Patterns Using a Capacitive Sensor Floor and Recurrent Neural Networks (Sensors 2021, 21, 1086)

Hoffmann, R., Brodowski, H., Steinhage, A. & Grzegorzek, M., 01.07.2022, In: Sensors. 22, 13, 4896.

Research output: Journal Articles › Comments/Debates

1 Citation (Scopus)

Data Driven Sensor Model for Wi-Fi Fine Timing Measurement

Bullmann, M., Fetzer, T., Ebner, M., Kastner, S., Deinzer, F. & Grzegorzek, M., 26.10.2022, 2022 IEEE 12th International Conference on Indoor Positioning and Indoor Navigation (IPIN). IEEE

Research output: Chapters in Books/Reports/Conference Proceedings › Conference contribution › peer-review

Deep learning-based simultaneous registration and unsupervised non-correspondence segmentation of medical images with pathologies

Andresen, J., Kepp, T., Ehrhardt, J., von der Burchard, C., Roider, J. & Handels, H., 04.2022, In: International Journal of Computer Assisted Radiology and Surgery. 17, 4, p. 699-710 12 p., 4.

Research output: Journal Articles › Journal articles › Research › peer-review

Institute of Medical Informatics

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